Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPRD1AQ96P16 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 CICP11-201ENST00000434745 2827 ntBASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 AC239800.4-201ENST00000603712 296 ntBASIC15.91■□□□□ 0.14
RPRD1AQ96P16 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.91■□□□□ 0.14
RPRD1AQ96P16 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPRD1AQ96P16 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 TSPY26P-202ENST00000565928 3884 ntBASIC15.9■□□□□ 0.14
RPRD1AQ96P16 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 C18orf15-201ENST00000623680 2534 ntBASIC15.9■□□□□ 0.14
RPRD1AQ96P16 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 AC005252.2-201ENST00000624630 1141 ntBASIC15.9■□□□□ 0.14
RPRD1AQ96P16 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPRD1AQ96P16 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
RPRD1AQ96P16 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms