Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.38■□□□□ 0.21
TRIM11Q96F44 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM11Q96F44 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM11Q96F44 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 AC100757.3-201ENST00000622361 1406 ntBASIC16.37■□□□□ 0.21
TRIM11Q96F44 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 FGD5P1-202ENST00000614866 2498 ntBASIC16.37■□□□□ 0.21
TRIM11Q96F44 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 AC092580.3-201ENST00000430932 139 ntBASIC16.37■□□□□ 0.21
TRIM11Q96F44 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 AC092337.1-201ENST00000568699 1129 ntBASIC16.37■□□□□ 0.21
TRIM11Q96F44 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 AC093028.1-201ENST00000622998 982 ntBASIC16.37■□□□□ 0.21
TRIM11Q96F44 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 REXO1L2P-201ENST00000425429 2069 ntBASIC16.37■□□□□ 0.21
TRIM11Q96F44 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM11Q96F44 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRIM11Q96F44 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 BTBD7P1-201ENST00000447253 1453 ntBASIC16.36■□□□□ 0.21
TRIM11Q96F44 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 CICP24-201ENST00000605464 2705 ntBASIC16.36■□□□□ 0.21
TRIM11Q96F44 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 TREML5P-201ENST00000421694 576 ntBASIC16.36■□□□□ 0.21
TRIM11Q96F44 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 AC114501.2-201ENST00000439631 535 ntBASIC16.36■□□□□ 0.21
TRIM11Q96F44 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 AC097493.3-201ENST00000509725 367 ntBASIC16.36■□□□□ 0.21
TRIM11Q96F44 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 CICP23-201ENST00000605013 2741 ntBASIC16.36■□□□□ 0.21
TRIM11Q96F44 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
TRIM11Q96F44 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM11Q96F44 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms