Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST2Q8NFU1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 MIR658-201ENST00000385210 100 ntBASIC16.57■□□□□ 0.24
BEST2Q8NFU1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 AC114812.1-204ENST00000449669 728 ntBASIC16.57■□□□□ 0.24
BEST2Q8NFU1 CROCCP4-201ENST00000457096 498 ntBASIC16.57■□□□□ 0.24
BEST2Q8NFU1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 SNX29P1-201ENST00000548357 1007 ntBASIC16.57■□□□□ 0.24
BEST2Q8NFU1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 MIR4259-201ENST00000584466 101 ntBASIC16.57■□□□□ 0.24
BEST2Q8NFU1 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST2Q8NFU1 TMBIM7P-203ENST00000641617 1718 ntBASIC16.56■□□□□ 0.24
BEST2Q8NFU1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 KRT8P35-201ENST00000483942 1338 ntBASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AP005482.1-201ENST00000563722 1273 ntBASIC16.56■□□□□ 0.24
BEST2Q8NFU1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST2Q8NFU1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms