Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 AC073347.1-201ENST00000421633 2643 ntBASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 AC138761.1-201ENST00000584393 385 ntBASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 CHCHD2P3-201ENST00000603038 451 ntBASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CCDC148Q8NFR7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 MYCLP2-201ENST00000449268 967 ntBASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 VDAC1P7-201ENST00000462417 847 ntBASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 TMEM261P1-201ENST00000604899 340 ntBASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AL662799.1-202ENST00000614205 422 ntBASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AC099063.4-201ENST00000641099 1602 ntBASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 INTS4P2-202ENST00000614726 2019 ntBASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC148Q8NFR7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 GAPDHP40-201ENST00000505218 1006 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 AC026410.3-201ENST00000514280 936 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 AC092552.1-201ENST00000547243 906 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 TP53TG3HP-202ENST00000569755 579 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 SPDYE22P-201ENST00000582158 798 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 AC008494.3-201ENST00000606615 944 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 MIR8072-201ENST00000614241 80 ntBASIC17.81■□□□□ 0.44
CCDC148Q8NFR7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms