Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TPRX2P-201ENST00000535362 881 ntBASIC13.57□□□□□ -0.24
CPEB3Q8NE35 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 MIR3197-201ENST00000582241 73 ntBASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TSPY26P-202ENST00000565928 3884 ntBASIC13.57□□□□□ -0.24
CPEB3Q8NE35 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TERF1P3-201ENST00000505638 1227 ntBASIC13.56□□□□□ -0.24
CPEB3Q8NE35 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 RARRES2P5-201ENST00000564013 466 ntBASIC13.56□□□□□ -0.24
CPEB3Q8NE35 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 MIR4745-201ENST00000577608 62 ntBASIC13.56□□□□□ -0.24
CPEB3Q8NE35 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 RN7SL204P-201ENST00000582831 262 ntBASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 LINC02560-201ENST00000596379 459 ntBASIC13.56□□□□□ -0.24
CPEB3Q8NE35 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms