Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 SNX18-202ENST00000343017 3140 ntBASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf42Q8N5U0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 RN7SL204P-201ENST00000582831 262 ntBASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 SRD5A3P1-201ENST00000603021 949 ntBASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.96□□□□□ -0.33
C11orf42Q8N5U0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf42Q8N5U0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf42Q8N5U0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
C11orf42Q8N5U0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf42Q8N5U0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
C11orf42Q8N5U0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 OR2I1P-209ENST00000641730 5365 ntBASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 TOMM22P5-201ENST00000416399 439 ntBASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 SPTLC1P1-201ENST00000447199 261 ntBASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AL589987.1-201ENST00000453380 819 ntBASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
C11orf42Q8N5U0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms