Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.54■□□□□ 0.08
CRLF3Q8IUI8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AC140479.7-201ENST00000636301 2332 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AC004987.2-201ENST00000395959 1148 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 FAM8A3P-201ENST00000427218 844 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SPDYE11-202ENST00000450699 704 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 FAM86C2P-203ENST00000528684 1004 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SPDYE9P-201ENST00000570642 692 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SPDYE10P-202ENST00000612005 668 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SPDYE8P-202ENST00000612377 668 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.53■□□□□ 0.08
CRLF3Q8IUI8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CRLF3Q8IUI8 TSEN15P1-201ENST00000423257 515 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms