Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LRRC28Q86X40 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LRRC28Q86X40 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AL137784.3-201ENST00000623858 2288 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AC134407.2-201ENST00000625089 1978 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AL645939.2-201ENST00000427340 991 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 FAM58DP-201ENST00000428076 619 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AC093724.1-201ENST00000448659 1027 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AC025678.2-201ENST00000562061 970 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AL138918.1-201ENST00000568306 659 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AC127383.1-201ENST00000444697 1800 ntBASIC13.84□□□□□ -0.19
LRRC28Q86X40 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRRC28Q86X40 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRC28Q86X40 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRC28Q86X40 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.83□□□□□ -0.19
LRRC28Q86X40 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
LRRC28Q86X40 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRC28Q86X40 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.83□□□□□ -0.2
LRRC28Q86X40 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 CICP14-201ENST00000629111 2732 ntBASIC13.83□□□□□ -0.2
LRRC28Q86X40 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AP000842.3-202ENST00000569238 1080 ntBASIC13.83□□□□□ -0.2
LRRC28Q86X40 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 LINC00628-201ENST00000628516 1289 ntBASIC13.83□□□□□ -0.2
LRRC28Q86X40 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms