Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC004686.1-201ENST00000605113 538 ntBASIC12.68□□□□□ -0.38
CSMD2Q7Z408 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.68□□□□□ -0.38
CSMD2Q7Z408 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.68□□□□□ -0.38
CSMD2Q7Z408 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 MIR4313-201ENST00000580760 101 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 PEBP1P2-201ENST00000603980 558 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AC233280.19-201ENST00000633223 136 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AL109837.1-201ENST00000603272 613 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 GCSHP3-201ENST00000431120 391 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AC004837.1-201ENST00000446267 564 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AL135901.1-201ENST00000451812 333 ntBASIC12.67□□□□□ -0.38
CSMD2Q7Z408 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD2Q7Z408 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 AC006548.2-201ENST00000605217 529 ntBASIC12.66□□□□□ -0.38
CSMD2Q7Z408 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 CTSL-202ENST00000342020 933 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CSMD2Q7Z408 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms