Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2AQ7L7L0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC148477.4-201ENST00000613430 1793 ntBASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC126365.1-201ENST00000578585 1514 ntBASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC025678.2-201ENST00000562061 970 ntBASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2AQ7L7L0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 MIR1233-2-201ENST00000408138 82 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 MIR1233-1-201ENST00000408722 82 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 HIST3H2BA-201ENST00000436555 524 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 TARDBPP1-201ENST00000442013 1203 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 CNN2P2-201ENST00000443536 909 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 CNN2P3-201ENST00000450201 906 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 AL136317.3-201ENST00000618497 906 ntBASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2AQ7L7L0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms