Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC005034.1-201ENST00000426657 489 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 FAM58DP-201ENST00000428076 619 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 AC125807.1-201ENST00000483097 614 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 AC069335.1-201ENST00000489972 472 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 RARRES2P8-201ENST00000566335 367 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 KRT8P44-201ENST00000441609 1350 ntBASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXR1Q6PIV2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC236430.1-201ENST00000402231 743 ntBASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC055876.3-201ENST00000431496 288 ntBASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC243562.1-201ENST00000560672 389 ntBASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC138649.4-201ENST00000612222 287 ntBASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXR1Q6PIV2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
FOXR1Q6PIV2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms