Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 RNF152P1-201ENST00000397754 604 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 PTCHD3P3-201ENST00000403073 906 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 AC093724.1-201ENST00000448659 1027 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 PRYP5-201ENST00000451909 266 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 MIR4313-201ENST00000580760 101 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 NTF6B-201ENST00000591913 560 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 Z69720.1-201ENST00000601483 472 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 AC145285.6-201ENST00000604632 637 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 AC114341.1-201ENST00000618070 349 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 PPT1-213ENST00000641319 2388 ntBASIC11.75□□□□□ -0.53
MRPL54Q6P161 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL54Q6P161 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
MRPL54Q6P161 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 MIR935-201ENST00000401179 91 ntBASIC11.74□□□□□ -0.53
MRPL54Q6P161 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AC021097.1-201ENST00000607902 574 ntBASIC11.74□□□□□ -0.53
MRPL54Q6P161 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.74□□□□□ -0.53
MRPL54Q6P161 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AL022326.1-202ENST00000641533 845 ntBASIC11.74□□□□□ -0.53
MRPL54Q6P161 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AC233702.3-201ENST00000578656 1387 ntBASIC11.74□□□□□ -0.53
MRPL54Q6P161 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 REXO1L1P-201ENST00000379010 6598 ntBASIC11.74□□□□□ -0.53
MRPL54Q6P161 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL54Q6P161 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms