Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 AC234783.1-201ENST00000441761 496 ntBASIC16.26■□□□□ 0.19
RNF43Q68DV7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 AC092552.1-201ENST00000547243 906 ntBASIC16.26■□□□□ 0.19
RNF43Q68DV7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF43Q68DV7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF43Q68DV7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 TIMM17BP1-201ENST00000545713 516 ntBASIC16.25■□□□□ 0.19
RNF43Q68DV7 AL512343.1-201ENST00000605837 169 ntBASIC16.25■□□□□ 0.19
RNF43Q68DV7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AL158212.4-201ENST00000624062 1286 ntBASIC16.25■□□□□ 0.19
RNF43Q68DV7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF43Q68DV7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF43Q68DV7 AL133338.1-201ENST00000565695 1517 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 AL359258.3-201ENST00000622910 2331 ntBASIC16.24■□□□□ 0.19
RNF43Q68DV7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF43Q68DV7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF43Q68DV7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms