Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC005632.3-201ENST00000605544 308 ntBASIC14.43□□□□□ -0.1
FOXC1Q12948 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXC1Q12948 AC073911.3-201ENST00000624401 631 ntBASIC14.43□□□□□ -0.1
FOXC1Q12948 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXC1Q12948 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FOXC1Q12948 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXC1Q12948 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXC1Q12948 FER1L4-210ENST00000615531 5998 ntBASIC14.43□□□□□ -0.1
FOXC1Q12948 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXC1Q12948 AC055811.4-201ENST00000624039 1754 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXC1Q12948 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FOXC1Q12948 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXC1Q12948 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
FOXC1Q12948 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 AC026320.2-201ENST00000434379 478 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 ACTG1P22-201ENST00000603793 1099 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 AL358472.3-201ENST00000608147 415 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 AC087392.5-201ENST00000612517 489 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 AC092299.1-201ENST00000632679 757 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXC1Q12948 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
FOXC1Q12948 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXC1Q12948 AC106820.2-201ENST00000563775 3264 ntBASIC14.42□□□□□ -0.1
FOXC1Q12948 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXC1Q12948 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXC1Q12948 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 FKBP4P6-201ENST00000457486 1332 ntBASIC14.41□□□□□ -0.1
FOXC1Q12948 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXC1Q12948 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
FOXC1Q12948 E2F3P2-201ENST00000447755 1422 ntBASIC14.41□□□□□ -0.1
FOXC1Q12948 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXC1Q12948 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXC1Q12948 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXC1Q12948 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXC1Q12948 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXC1Q12948 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXC1Q12948 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXC1Q12948 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXC1Q12948 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXC1Q12948 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FOXC1Q12948 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms