Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDH1Q08174 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDH1Q08174 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 AL158212.4-201ENST00000624062 1286 ntBASIC14.94□□□□□ -0.02
PCDH1Q08174 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 AC004840.1-201ENST00000636359 365 ntBASIC14.94□□□□□ -0.02
PCDH1Q08174 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDH1Q08174 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDH1Q08174 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 LINC01101-201ENST00000622953 1884 ntBASIC14.93□□□□□ -0.02
PCDH1Q08174 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH1Q08174 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH1Q08174 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
PCDH1Q08174 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDH1Q08174 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDH1Q08174 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDH1Q08174 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH1Q08174 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDH1Q08174 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDH1Q08174 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH1Q08174 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDH1Q08174 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDH1Q08174 CICP11-201ENST00000434745 2827 ntBASIC14.93□□□□□ -0.02
PCDH1Q08174 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 AC091951.1-201ENST00000512854 2465 ntBASIC14.92□□□□□ -0.02
PCDH1Q08174 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 MRPS18AP1-201ENST00000414458 589 ntBASIC14.92□□□□□ -0.02
PCDH1Q08174 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms