Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
NKX6-1P78426 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX6-1P78426 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX6-1P78426 REXO1L1P-202ENST00000608646 1974 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 AC011477.6-201ENST00000604980 1927 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 Z97205.2-201ENST00000564697 1639 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NKX6-1P78426 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
NKX6-1P78426 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.72□□□□□ -0.21
NKX6-1P78426 KRT43P-201ENST00000434019 910 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.72□□□□□ -0.21
NKX6-1P78426 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.72□□□□□ -0.21
NKX6-1P78426 AC119751.2-201ENST00000504529 210 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.72□□□□□ -0.21
NKX6-1P78426 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 RN7SL219P-201ENST00000582872 296 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 AC074044.1-201ENST00000609673 707 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 AL109936.8-201ENST00000641772 604 ntBASIC13.72□□□□□ -0.21
NKX6-1P78426 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NKX6-1P78426 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NKX6-1P78426 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.72□□□□□ -0.21
NKX6-1P78426 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX6-1P78426 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX6-1P78426 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX6-1P78426 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC092384.3-202ENST00000564646 2873 ntBASIC13.71□□□□□ -0.21
NKX6-1P78426 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
NKX6-1P78426 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.71□□□□□ -0.21
NKX6-1P78426 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NKX6-1P78426 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.71□□□□□ -0.21
NKX6-1P78426 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX6-1P78426 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 PHKG1P2-201ENST00000457537 863 ntBASIC13.71□□□□□ -0.21
NKX6-1P78426 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC104596.2-201ENST00000512793 793 ntBASIC13.71□□□□□ -0.21
NKX6-1P78426 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AC015936.2-201ENST00000593177 259 ntBASIC13.71□□□□□ -0.21
NKX6-1P78426 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.71□□□□□ -0.21
NKX6-1P78426 AL033527.5-201ENST00000641382 801 ntBASIC13.71□□□□□ -0.21
NKX6-1P78426 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NKX6-1P78426 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms