Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 MIR658-201ENST00000385210 100 ntBASIC16.28■□□□□ 0.2
USP46P62068 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.28■□□□□ 0.2
USP46P62068 AP001582.1-201ENST00000525856 295 ntBASIC16.28■□□□□ 0.2
USP46P62068 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
USP46P62068 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.28■□□□□ 0.2
USP46P62068 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.28■□□□□ 0.2
USP46P62068 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.28■□□□□ 0.2
USP46P62068 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 AC093813.1-201ENST00000605066 256 ntBASIC16.28■□□□□ 0.2
USP46P62068 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.28■□□□□ 0.2
USP46P62068 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
USP46P62068 MIR6775-201ENST00000617557 69 ntBASIC16.28■□□□□ 0.2
USP46P62068 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
USP46P62068 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.28■□□□□ 0.2
USP46P62068 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP46P62068 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 AC104581.4-201ENST00000623126 3052 ntBASIC16.27■□□□□ 0.2
USP46P62068 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
USP46P62068 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.27■□□□□ 0.2
USP46P62068 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USP46P62068 PTP4A1P2-201ENST00000546033 454 ntBASIC16.27■□□□□ 0.2
USP46P62068 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 AP001063.1-201ENST00000568332 529 ntBASIC16.27■□□□□ 0.2
USP46P62068 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.27■□□□□ 0.2
USP46P62068 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 CFTRP2-201ENST00000634304 199 ntBASIC16.27■□□□□ 0.2
USP46P62068 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.27■□□□□ 0.2
USP46P62068 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP46P62068 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
USP46P62068 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.27■□□□□ 0.19
USP46P62068 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.27■□□□□ 0.19
USP46P62068 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP46P62068 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.27■□□□□ 0.19
USP46P62068 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP46P62068 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USP46P62068 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USP46P62068 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms