Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHB4P54760 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 AC104306.2-201ENST00000451877 341 ntBASIC17.41■□□□□ 0.38
EPHB4P54760 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 AC079316.1-201ENST00000548397 411 ntBASIC17.41■□□□□ 0.38
EPHB4P54760 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHB4P54760 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.41■□□□□ 0.38
EPHB4P54760 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.41■□□□□ 0.38
EPHB4P54760 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 MIR6727-201ENST00000620702 65 ntBASIC17.41■□□□□ 0.38
EPHB4P54760 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 AC134312.5-201ENST00000568031 1313 ntBASIC17.41■□□□□ 0.38
EPHB4P54760 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
EPHB4P54760 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.41■□□□□ 0.38
EPHB4P54760 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EPHB4P54760 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
EPHB4P54760 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHB4P54760 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
EPHB4P54760 AZGP1P1-201ENST00000411909 902 ntBASIC17.4■□□□□ 0.38
EPHB4P54760 SOCS2P1-201ENST00000417727 557 ntBASIC17.4■□□□□ 0.38
EPHB4P54760 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.4■□□□□ 0.38
EPHB4P54760 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.4■□□□□ 0.38
EPHB4P54760 AC012441.1-201ENST00000446669 685 ntBASIC17.4■□□□□ 0.38
EPHB4P54760 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
EPHB4P54760 AC093433.1-201ENST00000458048 571 ntBASIC17.4■□□□□ 0.38
EPHB4P54760 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.4■□□□□ 0.38
EPHB4P54760 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHB4P54760 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
EPHB4P54760 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.4■□□□□ 0.38
EPHB4P54760 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.4■□□□□ 0.38
EPHB4P54760 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.4■□□□□ 0.38
EPHB4P54760 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EPHB4P54760 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EPHB4P54760 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.39■□□□□ 0.38
EPHB4P54760 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EPHB4P54760 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
EPHB4P54760 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EPHB4P54760 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHB4P54760 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHB4P54760 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
EPHB4P54760 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
EPHB4P54760 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
EPHB4P54760 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHB4P54760 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHB4P54760 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHB4P54760 GNRHR2-203ENST00000581100 1187 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms