Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.75□□□□□ -0.21
SLC25A1P53007 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SLC25A1P53007 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 RN7SL618P-201ENST00000477850 296 ntBASIC13.74□□□□□ -0.21
SLC25A1P53007 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.74□□□□□ -0.21
SLC25A1P53007 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 AL512361.1-201ENST00000554200 418 ntBASIC13.74□□□□□ -0.21
SLC25A1P53007 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
SLC25A1P53007 TEX28P1-201ENST00000613479 1221 ntBASIC13.74□□□□□ -0.21
SLC25A1P53007 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 TEX28P2-201ENST00000617764 1221 ntBASIC13.74□□□□□ -0.21
SLC25A1P53007 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.74□□□□□ -0.21
SLC25A1P53007 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SLC25A1P53007 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
SLC25A1P53007 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
SLC25A1P53007 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
SLC25A1P53007 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SLC25A1P53007 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SLC25A1P53007 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC25A1P53007 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.73□□□□□ -0.21
SLC25A1P53007 CNN2P11-201ENST00000429351 262 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 SDHAP3-202ENST00000515467 728 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC25A1P53007 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC25A1P53007 AC010336.2-201ENST00000564226 506 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 AC051619.7-201ENST00000568314 623 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SLC25A1P53007 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 AC000095.1-201ENST00000603208 874 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 SPDYE12P-201ENST00000618416 771 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC25A1P53007 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC25A1P53007 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.73□□□□□ -0.21
SLC25A1P53007 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SLC25A1P53007 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 AC007787.1-201ENST00000588095 1583 ntBASIC13.73□□□□□ -0.21
SLC25A1P53007 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC25A1P53007 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms