Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCR9P51686 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCR9P51686 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCR9P51686 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.68□□□□□ -0.22
CCR9P51686 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.68□□□□□ -0.22
CCR9P51686 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCR9P51686 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CCR9P51686 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCR9P51686 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCR9P51686 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCR9P51686 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.68□□□□□ -0.22
CCR9P51686 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CCR9P51686 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CCR9P51686 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCR9P51686 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CCR9P51686 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCR9P51686 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 MCCD1P2-201ENST00000423228 335 ntBASIC13.67□□□□□ -0.22
CCR9P51686 AL353705.2-201ENST00000428243 662 ntBASIC13.67□□□□□ -0.22
CCR9P51686 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.67□□□□□ -0.22
CCR9P51686 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.67□□□□□ -0.22
CCR9P51686 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.67□□□□□ -0.22
CCR9P51686 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 UXT-AS1-201ENST00000590504 1525 ntBASIC13.67□□□□□ -0.22
CCR9P51686 AL137784.3-201ENST00000623858 2288 ntBASIC13.67□□□□□ -0.22
CCR9P51686 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.67□□□□□ -0.22
CCR9P51686 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
CCR9P51686 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.67□□□□□ -0.22
CCR9P51686 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.67□□□□□ -0.22
CCR9P51686 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.67□□□□□ -0.22
CCR9P51686 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CCR9P51686 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCR9P51686 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
CCR9P51686 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 AL592309.1-201ENST00000443127 649 ntBASIC13.66□□□□□ -0.22
CCR9P51686 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
CCR9P51686 AC069335.1-201ENST00000489972 472 ntBASIC13.66□□□□□ -0.22
CCR9P51686 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.66□□□□□ -0.22
CCR9P51686 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.66□□□□□ -0.22
CCR9P51686 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.66□□□□□ -0.22
CCR9P51686 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 AC006504.5-208ENST00000588784 2401 ntBASIC13.66□□□□□ -0.22
CCR9P51686 REXO1L2P-201ENST00000425429 2069 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms