Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HCFC1P51610 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HCFC1P51610 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HCFC1P51610 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HCFC1P51610 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.36□□□□□ -0.27
HCFC1P51610 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HCFC1P51610 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HCFC1P51610 CYP46A4P-201ENST00000414953 267 ntBASIC13.36□□□□□ -0.27
HCFC1P51610 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 AC114812.1-204ENST00000449669 728 ntBASIC13.36□□□□□ -0.27
HCFC1P51610 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.36□□□□□ -0.27
HCFC1P51610 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HCFC1P51610 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.36□□□□□ -0.27
HCFC1P51610 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
HCFC1P51610 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HCFC1P51610 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.36□□□□□ -0.27
HCFC1P51610 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 SPTLC1P5-201ENST00000450718 252 ntBASIC13.35□□□□□ -0.27
HCFC1P51610 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.35□□□□□ -0.27
HCFC1P51610 ENPP7P14-201ENST00000621765 1040 ntBASIC13.35□□□□□ -0.27
HCFC1P51610 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HCFC1P51610 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.35□□□□□ -0.27
HCFC1P51610 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.35□□□□□ -0.27
HCFC1P51610 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.35□□□□□ -0.27
HCFC1P51610 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HCFC1P51610 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.35□□□□□ -0.27
HCFC1P51610 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.35□□□□□ -0.27
HCFC1P51610 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.35□□□□□ -0.27
HCFC1P51610 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms