Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CBX5P45973 AL691432.1-201ENST00000596308 1422 ntBASIC13.42□□□□□ -0.26
CBX5P45973 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.42□□□□□ -0.26
CBX5P45973 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 RNPS1P1-201ENST00000507437 918 ntBASIC13.42□□□□□ -0.26
CBX5P45973 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.42□□□□□ -0.26
CBX5P45973 PRELID1P1-202ENST00000567272 903 ntBASIC13.42□□□□□ -0.26
CBX5P45973 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.42□□□□□ -0.26
CBX5P45973 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.42□□□□□ -0.26
CBX5P45973 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.42□□□□□ -0.26
CBX5P45973 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.42□□□□□ -0.26
CBX5P45973 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.42□□□□□ -0.26
CBX5P45973 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CBX5P45973 REXO1L1P-202ENST00000608646 1974 ntBASIC13.41□□□□□ -0.26
CBX5P45973 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.41□□□□□ -0.26
CBX5P45973 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CBX5P45973 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CBX5P45973 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 ZBED1P1-201ENST00000502364 1930 ntBASIC13.41□□□□□ -0.26
CBX5P45973 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CBX5P45973 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.41□□□□□ -0.26
CBX5P45973 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CBX5P45973 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms