Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 RPSAP43-201ENST00000402237 625 ntBASIC14.65□□□□□ -0.06
CDKN2CP42773 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2CP42773 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2CP42773 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2CP42773 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 AC025048.3-201ENST00000590609 569 ntBASIC14.65□□□□□ -0.06
CDKN2CP42773 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2CP42773 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2CP42773 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKN2CP42773 AC005702.4-201ENST00000618393 416 ntBASIC14.65□□□□□ -0.06
CDKN2CP42773 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.65□□□□□ -0.06
CDKN2CP42773 LINC00628-201ENST00000628516 1289 ntBASIC14.65□□□□□ -0.06
CDKN2CP42773 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKN2CP42773 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKN2CP42773 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKN2CP42773 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKN2CP42773 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKN2CP42773 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKN2CP42773 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDKN2CP42773 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.64□□□□□ -0.07
CDKN2CP42773 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKN2CP42773 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKN2CP42773 AC011467.4-201ENST00000594891 528 ntBASIC14.64□□□□□ -0.07
CDKN2CP42773 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 AP001059.3-201ENST00000619053 235 ntBASIC14.64□□□□□ -0.07
CDKN2CP42773 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDKN2CP42773 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKN2CP42773 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKN2CP42773 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKN2CP42773 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKN2CP42773 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CDKN2CP42773 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms