Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.55□□□□□ -0.24
GDNFP39905 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 FAM58CP-201ENST00000435741 640 ntBASIC13.54□□□□□ -0.24
GDNFP39905 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.54□□□□□ -0.24
GDNFP39905 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.54□□□□□ -0.24
GDNFP39905 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.54□□□□□ -0.24
GDNFP39905 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
GDNFP39905 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDNFP39905 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GDNFP39905 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GDNFP39905 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 AC087386.2-201ENST00000623212 4637 ntBASIC13.53□□□□□ -0.24
GDNFP39905 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.53□□□□□ -0.24
GDNFP39905 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.53□□□□□ -0.24
GDNFP39905 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.53□□□□□ -0.24
GDNFP39905 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.53□□□□□ -0.24
GDNFP39905 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GDNFP39905 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 PMS2P7-201ENST00000506558 1336 ntBASIC13.53□□□□□ -0.24
GDNFP39905 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
GDNFP39905 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GDNFP39905 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.53□□□□□ -0.24
GDNFP39905 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms