Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HTR1EP28566 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HTR1EP28566 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.87□□□□□ -0.03
HTR1EP28566 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.87□□□□□ -0.03
HTR1EP28566 NME2P1-201ENST00000426182 414 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 HLA-V-201ENST00000429037 534 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 PHKG1P2-201ENST00000457537 863 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR1EP28566 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.87□□□□□ -0.03
HTR1EP28566 SERBP1P5-201ENST00000510079 1181 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR1EP28566 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.87□□□□□ -0.03
HTR1EP28566 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 AL662799.1-202ENST00000614205 422 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 SPTSSB-204ENST00000617024 1292 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 MIR6752-201ENST00000618442 71 ntBASIC14.87□□□□□ -0.03
HTR1EP28566 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 AC241585.1-201ENST00000433527 519 ntBASIC14.86□□□□□ -0.03
HTR1EP28566 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.86□□□□□ -0.03
HTR1EP28566 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 AL596325.1-201ENST00000563991 1082 ntBASIC14.86□□□□□ -0.03
HTR1EP28566 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 AC009118.2-201ENST00000613275 655 ntBASIC14.86□□□□□ -0.03
HTR1EP28566 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.86□□□□□ -0.03
HTR1EP28566 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.86□□□□□ -0.03
HTR1EP28566 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.86□□□□□ -0.03
HTR1EP28566 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.86□□□□□ -0.03
HTR1EP28566 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HTR1EP28566 CICP14-201ENST00000629111 2732 ntBASIC14.86□□□□□ -0.03
HTR1EP28566 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HTR1EP28566 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HTR1EP28566 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HTR1EP28566 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HTR1EP28566 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.85□□□□□ -0.03
HTR1EP28566 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HTR1EP28566 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.85□□□□□ -0.03
HTR1EP28566 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.85□□□□□ -0.03
HTR1EP28566 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.85□□□□□ -0.03
HTR1EP28566 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HTR1EP28566 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HTR1EP28566 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HTR1EP28566 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms