Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 AL136982.4-201ENST00000437689 1740 ntBASIC16.05■□□□□ 0.16
H2AFXP16104 OS9-206ENST00000435406 2346 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 AL607033.1-201ENST00000623900 1599 ntBASIC16.04■□□□□ 0.16
H2AFXP16104 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2AFXP16104 KRT8P37-201ENST00000451609 1420 ntBASIC16.04■□□□□ 0.16
H2AFXP16104 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFXP16104 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
H2AFXP16104 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
H2AFXP16104 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFXP16104 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2AFXP16104 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.04■□□□□ 0.16
H2AFXP16104 NUS1P2-201ENST00000417358 873 ntBASIC16.04■□□□□ 0.16
H2AFXP16104 AC087499.1-201ENST00000418141 1075 ntBASIC16.04■□□□□ 0.16
H2AFXP16104 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
H2AFXP16104 AC109635.5-201ENST00000533593 962 ntBASIC16.04■□□□□ 0.16
H2AFXP16104 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.04■□□□□ 0.16
H2AFXP16104 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.04■□□□□ 0.16
H2AFXP16104 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
H2AFXP16104 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.04■□□□□ 0.16
H2AFXP16104 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
H2AFXP16104 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
H2AFXP16104 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 OR2I1P-209ENST00000641730 5365 ntBASIC16.04■□□□□ 0.16
H2AFXP16104 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.04■□□□□ 0.16
H2AFXP16104 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2AFXP16104 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
H2AFXP16104 AC012617.1-204ENST00000586340 2305 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.03■□□□□ 0.16
H2AFXP16104 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2AFXP16104 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.03■□□□□ 0.16
H2AFXP16104 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 RBM17P3-201ENST00000417687 1192 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.03■□□□□ 0.16
H2AFXP16104 LINC00265-3P-201ENST00000447588 903 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 AC063952.2-201ENST00000498792 1227 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 AL031432.2-201ENST00000566714 459 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 AL928711.1-201ENST00000570165 459 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 SPTSSB-204ENST00000617024 1292 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.03■□□□□ 0.16
H2AFXP16104 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 TCAM1P-207ENST00000485295 1537 ntBASIC16.03■□□□□ 0.16
H2AFXP16104 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.03■□□□□ 0.16
H2AFXP16104 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2AFXP16104 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.03■□□□□ 0.16
H2AFXP16104 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFXP16104 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFXP16104 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
H2AFXP16104 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFXP16104 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFXP16104 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
H2AFXP16104 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFXP16104 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2AFXP16104 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms