Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.26■□□□□ 0.19
RARAP10276 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RARAP10276 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.26■□□□□ 0.19
RARAP10276 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RARAP10276 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 RPL5P21-201ENST00000404620 815 ntBASIC16.25■□□□□ 0.19
RARAP10276 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.25■□□□□ 0.19
RARAP10276 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RARAP10276 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.25■□□□□ 0.19
RARAP10276 TSSK5P-201ENST00000423978 907 ntBASIC16.25■□□□□ 0.19
RARAP10276 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RARAP10276 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.25■□□□□ 0.19
RARAP10276 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.25■□□□□ 0.19
RARAP10276 ZNF890P-202ENST00000530367 1156 ntBASIC16.25■□□□□ 0.19
RARAP10276 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RARAP10276 AC015910.1-201ENST00000579400 975 ntBASIC16.25■□□□□ 0.19
RARAP10276 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
RARAP10276 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.25■□□□□ 0.19
RARAP10276 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RARAP10276 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.25■□□□□ 0.19
RARAP10276 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RARAP10276 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RARAP10276 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RARAP10276 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RARAP10276 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.24■□□□□ 0.19
RARAP10276 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.24■□□□□ 0.19
RARAP10276 TOMM22P5-201ENST00000416399 439 ntBASIC16.24■□□□□ 0.19
RARAP10276 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.24■□□□□ 0.19
RARAP10276 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.24■□□□□ 0.19
RARAP10276 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RARAP10276 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RARAP10276 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RARAP10276 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 415.8 ms