Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC172P0C7W6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AC067750.1-201ENST00000608826 6545 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 WASH3P-207ENST00000560956 1394 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 FO538757.1-201ENST00000623083 1397 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 TARDBPP1-201ENST00000442013 1203 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AL512356.2-201ENST00000546955 174 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AL589739.1-201ENST00000607720 493 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AGAP7P-201ENST00000582299 2062 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 AGAP14-201ENST00000624701 2060 ntBASIC16.81■□□□□ 0.28
CCDC172P0C7W6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC172P0C7W6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AC007686.3-201ENST00000619017 3487 ntBASIC16.8■□□□□ 0.28
CCDC172P0C7W6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC172P0C7W6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms