Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.55□□□□□ -0.24
SFTPBP07988 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SFTPBP07988 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SFTPBP07988 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
SFTPBP07988 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SFTPBP07988 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 HLA-H-201ENST00000383620 1096 ntBASIC13.54□□□□□ -0.24
SFTPBP07988 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.54□□□□□ -0.24
SFTPBP07988 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.54□□□□□ -0.24
SFTPBP07988 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
SFTPBP07988 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 PTENP1-202ENST00000532280 3996 ntBASIC13.54□□□□□ -0.24
SFTPBP07988 AC007686.3-201ENST00000619017 3487 ntBASIC13.54□□□□□ -0.24
SFTPBP07988 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.54□□□□□ -0.24
SFTPBP07988 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 CYP4F24P-201ENST00000586049 1580 ntBASIC13.54□□□□□ -0.24
SFTPBP07988 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SFTPBP07988 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.54□□□□□ -0.24
SFTPBP07988 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 CICP24-201ENST00000605464 2705 ntBASIC13.53□□□□□ -0.24
SFTPBP07988 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.53□□□□□ -0.24
SFTPBP07988 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 SPDYE14P-201ENST00000442619 822 ntBASIC13.53□□□□□ -0.24
SFTPBP07988 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.53□□□□□ -0.24
SFTPBP07988 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.53□□□□□ -0.24
SFTPBP07988 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.53□□□□□ -0.24
SFTPBP07988 AC026150.2-201ENST00000564693 1156 ntBASIC13.53□□□□□ -0.24
SFTPBP07988 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.53□□□□□ -0.24
SFTPBP07988 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.53□□□□□ -0.24
SFTPBP07988 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.53□□□□□ -0.24
SFTPBP07988 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SFTPBP07988 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms