Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.85■□□□□ 0.77
COL5A2P05997 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.85■□□□□ 0.77
COL5A2P05997 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.85■□□□□ 0.77
COL5A2P05997 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
COL5A2P05997 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 AC009884.2-201ENST00000603110 324 ntBASIC19.85■□□□□ 0.77
COL5A2P05997 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
COL5A2P05997 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL5A2P05997 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.84■□□□□ 0.77
COL5A2P05997 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 AD000864.1-201ENST00000624076 2295 ntBASIC19.84■□□□□ 0.77
COL5A2P05997 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.84■□□□□ 0.77
COL5A2P05997 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 RPL7P35-201ENST00000446943 740 ntBASIC19.84■□□□□ 0.77
COL5A2P05997 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC19.84■□□□□ 0.77
COL5A2P05997 TMCO5B-205ENST00000530020 894 ntBASIC19.84■□□□□ 0.77
COL5A2P05997 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL5A2P05997 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.84■□□□□ 0.77
COL5A2P05997 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.84■□□□□ 0.77
COL5A2P05997 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL5A2P05997 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.83■□□□□ 0.77
COL5A2P05997 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COL5A2P05997 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 LINC01165-201ENST00000445190 1623 ntBASIC19.83■□□□□ 0.77
COL5A2P05997 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL5A2P05997 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 AC003102.2-201ENST00000589195 1469 ntBASIC19.83■□□□□ 0.77
COL5A2P05997 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COL5A2P05997 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.83■□□□□ 0.77
COL5A2P05997 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL5A2P05997 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.83■□□□□ 0.76
COL5A2P05997 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.83■□□□□ 0.76
COL5A2P05997 AC079112.1-201ENST00000454972 939 ntBASIC19.83■□□□□ 0.76
COL5A2P05997 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
COL5A2P05997 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC19.83■□□□□ 0.76
COL5A2P05997 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.83■□□□□ 0.76
COL5A2P05997 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.83■□□□□ 0.76
COL5A2P05997 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
COL5A2P05997 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
COL5A2P05997 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL5A2P05997 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.82■□□□□ 0.76
COL5A2P05997 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.82■□□□□ 0.76
COL5A2P05997 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 MIR557-201ENST00000385239 98 ntBASIC19.82■□□□□ 0.76
COL5A2P05997 KRT18P36-201ENST00000411618 1276 ntBASIC19.82■□□□□ 0.76
COL5A2P05997 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.82■□□□□ 0.76
COL5A2P05997 AC130709.1-201ENST00000484779 1212 ntBASIC19.82■□□□□ 0.76
COL5A2P05997 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.82■□□□□ 0.76
COL5A2P05997 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL5A2P05997 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.82■□□□□ 0.76
COL5A2P05997 CICP11-201ENST00000434745 2827 ntBASIC19.82■□□□□ 0.76
COL5A2P05997 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
COL5A2P05997 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.82■□□□□ 0.76
COL5A2P05997 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.82■□□□□ 0.76
COL5A2P05997 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL5A2P05997 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.81■□□□□ 0.76
COL5A2P05997 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL5A2P05997 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 815.4 ms