Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.03□□□□□ -0.32
CD74P04233 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.03□□□□□ -0.32
CD74P04233 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 IFNL4P1-201ENST00000607083 540 ntBASIC13.03□□□□□ -0.32
CD74P04233 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 CICP17-201ENST00000418553 2377 ntBASIC13.03□□□□□ -0.32
CD74P04233 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.03□□□□□ -0.32
CD74P04233 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.03□□□□□ -0.32
CD74P04233 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.02□□□□□ -0.32
CD74P04233 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CD74P04233 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.02□□□□□ -0.32
CD74P04233 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD74P04233 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CD74P04233 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CD74P04233 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.02□□□□□ -0.33
CD74P04233 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.02□□□□□ -0.33
CD74P04233 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.02□□□□□ -0.33
CD74P04233 AC142381.1-201ENST00000426099 345 ntBASIC13.02□□□□□ -0.33
CD74P04233 AC009947.1-201ENST00000444350 727 ntBASIC13.02□□□□□ -0.33
CD74P04233 AC092910.1-201ENST00000482027 1129 ntBASIC13.02□□□□□ -0.33
CD74P04233 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CD74P04233 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.02□□□□□ -0.33
CD74P04233 PRELID1P1-202ENST00000567272 903 ntBASIC13.02□□□□□ -0.33
CD74P04233 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.02□□□□□ -0.33
CD74P04233 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.02□□□□□ -0.33
CD74P04233 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.02□□□□□ -0.33
CD74P04233 AC026979.3-201ENST00000607315 403 ntBASIC13.02□□□□□ -0.33
CD74P04233 FAM215A-202ENST00000632077 792 ntBASIC13.02□□□□□ -0.33
CD74P04233 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD74P04233 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.02□□□□□ -0.33
CD74P04233 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD74P04233 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CD74P04233 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.02□□□□□ -0.33
CD74P04233 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CD74P04233 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.02□□□□□ -0.33
CD74P04233 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.02□□□□□ -0.33
CD74P04233 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.02□□□□□ -0.33
CD74P04233 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD74P04233 REXO1L4P-201ENST00000605109 1937 ntBASIC13.01□□□□□ -0.33
CD74P04233 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 AL122018.1-201ENST00000446607 2310 ntBASIC13.01□□□□□ -0.33
CD74P04233 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms