Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MIR5572-201ENST00000583188 137 ntBASIC18.47■□□□□ 0.55
COL4A1P02462 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.47■□□□□ 0.55
COL4A1P02462 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.47■□□□□ 0.55
COL4A1P02462 AL008718.2-201ENST00000609206 1313 ntBASIC18.47■□□□□ 0.55
COL4A1P02462 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL4A1P02462 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL4A1P02462 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.46■□□□□ 0.55
COL4A1P02462 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COL4A1P02462 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.46■□□□□ 0.55
COL4A1P02462 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.46■□□□□ 0.55
COL4A1P02462 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.46■□□□□ 0.55
COL4A1P02462 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 EEF1DP6-201ENST00000449232 372 ntBASIC18.46■□□□□ 0.55
COL4A1P02462 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.46■□□□□ 0.55
COL4A1P02462 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.46■□□□□ 0.55
COL4A1P02462 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.46■□□□□ 0.55
COL4A1P02462 SPCS2P2-201ENST00000603270 608 ntBASIC18.46■□□□□ 0.55
COL4A1P02462 AL023803.2-201ENST00000620080 638 ntBASIC18.46■□□□□ 0.55
COL4A1P02462 YRDCP1-201ENST00000621419 643 ntBASIC18.46■□□□□ 0.55
COL4A1P02462 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.46■□□□□ 0.55
COL4A1P02462 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.46■□□□□ 0.55
COL4A1P02462 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL4A1P02462 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
COL4A1P02462 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
COL4A1P02462 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL4A1P02462 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.45■□□□□ 0.54
COL4A1P02462 AC021723.1-201ENST00000486306 515 ntBASIC18.45■□□□□ 0.54
COL4A1P02462 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 RCC2P8-201ENST00000502779 1035 ntBASIC18.45■□□□□ 0.54
COL4A1P02462 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.45■□□□□ 0.54
COL4A1P02462 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.45■□□□□ 0.54
COL4A1P02462 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.45■□□□□ 0.54
COL4A1P02462 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 AC128714.1-201ENST00000637035 887 ntBASIC18.45■□□□□ 0.54
COL4A1P02462 AC004923.1-202ENST00000642106 209 ntBASIC18.45■□□□□ 0.54
COL4A1P02462 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL4A1P02462 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A1P02462 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.44■□□□□ 0.54
COL4A1P02462 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 AC012618.1-201ENST00000461223 412 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.44■□□□□ 0.54
COL4A1P02462 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 SNORD3B-2-202ENST00000571722 791 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL4A1P02462 AC012508.2-201ENST00000567613 1472 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.44■□□□□ 0.54
COL4A1P02462 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.44■□□□□ 0.54
COL4A1P02462 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 AC007950.2-201ENST00000615045 2347 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.44■□□□□ 0.54
COL4A1P02462 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 AC006058.4-201ENST00000624016 1670 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 CYP4F23P-201ENST00000593402 1579 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A1P02462 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COL4A1P02462 AL645933.1-201ENST00000440087 609 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 TMEM198B-204ENST00000484016 896 ntBASIC18.44■□□□□ 0.54
COL4A1P02462 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.44■□□□□ 0.54
COL4A1P02462 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A1P02462 DUX4L46-201ENST00000566845 751 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms