Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.31■□□□□ 0.52
COL1A1P02452 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.31■□□□□ 0.52
COL1A1P02452 AC138696.2-201ENST00000607376 223 ntBASIC18.31■□□□□ 0.52
COL1A1P02452 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.31■□□□□ 0.52
COL1A1P02452 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL1A1P02452 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL1A1P02452 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.3■□□□□ 0.52
COL1A1P02452 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 AL136309.1-201ENST00000403917 691 ntBASIC18.3■□□□□ 0.52
COL1A1P02452 FXNP2-201ENST00000411625 547 ntBASIC18.3■□□□□ 0.52
COL1A1P02452 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 AL451050.2-201ENST00000606967 682 ntBASIC18.3■□□□□ 0.52
COL1A1P02452 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.3■□□□□ 0.52
COL1A1P02452 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 AP000593.2-201ENST00000542775 1433 ntBASIC18.3■□□□□ 0.52
COL1A1P02452 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL1A1P02452 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL1A1P02452 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL1A1P02452 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.3■□□□□ 0.52
COL1A1P02452 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
COL1A1P02452 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 AC012508.2-201ENST00000567613 1472 ntBASIC18.29■□□□□ 0.52
COL1A1P02452 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
COL1A1P02452 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 EIF4HP1-201ENST00000453115 687 ntBASIC18.29■□□□□ 0.52
COL1A1P02452 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 FTLP10-202ENST00000505798 471 ntBASIC18.29■□□□□ 0.52
COL1A1P02452 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
COL1A1P02452 AC244157.2-201ENST00000616239 1006 ntBASIC18.29■□□□□ 0.52
COL1A1P02452 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL1A1P02452 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL1A1P02452 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL1A1P02452 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL1A1P02452 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.29■□□□□ 0.52
COL1A1P02452 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
COL1A1P02452 PPT1-215ENST00000641471 2368 ntBASIC18.28■□□□□ 0.52
COL1A1P02452 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 AL354877.1-201ENST00000424412 413 ntBASIC18.28■□□□□ 0.52
COL1A1P02452 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 SERPINA13P-202ENST00000478994 924 ntBASIC18.28■□□□□ 0.52
COL1A1P02452 AC100850.1-201ENST00000506768 649 ntBASIC18.28■□□□□ 0.52
COL1A1P02452 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.28■□□□□ 0.52
COL1A1P02452 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.28■□□□□ 0.52
COL1A1P02452 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms