Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 AL513480.1-201ENST00000451731 511 ntBASIC11.3□□□□□ -0.6
TNFRSF6BO95407 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 CXCL1P1-201ENST00000502804 216 ntBASIC11.3□□□□□ -0.6
TNFRSF6BO95407 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 AL450472.2-201ENST00000603663 1156 ntBASIC11.3□□□□□ -0.6
TNFRSF6BO95407 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 PEG13-201ENST00000631594 5667 ntBASIC11.3□□□□□ -0.6
TNFRSF6BO95407 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 AL031595.1-201ENST00000623969 4709 ntBASIC11.3□□□□□ -0.6
TNFRSF6BO95407 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
TNFRSF6BO95407 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 IER3-202ENST00000376377 1350 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC004987.2-201ENST00000395959 1148 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC109635.5-201ENST00000533593 962 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC021087.4-201ENST00000563761 564 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 OR7E47P-204ENST00000575924 449 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 NPAP1P7-201ENST00000613027 823 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MIR1199-201ENST00000621445 119 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TNFRSF6BO95407 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.29□□□□□ -0.6
TNFRSF6BO95407 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms