Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.24■□□□□ 0.35
CLSTN1O94985 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 AL079307.3-201ENST00000556114 283 ntBASIC17.24■□□□□ 0.35
CLSTN1O94985 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.24■□□□□ 0.35
CLSTN1O94985 AL138828.2-201ENST00000615812 383 ntBASIC17.24■□□□□ 0.35
CLSTN1O94985 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.24■□□□□ 0.35
CLSTN1O94985 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.24■□□□□ 0.35
CLSTN1O94985 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC17.24■□□□□ 0.35
CLSTN1O94985 PPT1-215ENST00000641471 2368 ntBASIC17.24■□□□□ 0.35
CLSTN1O94985 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CLSTN1O94985 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.24■□□□□ 0.35
CLSTN1O94985 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLSTN1O94985 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.23■□□□□ 0.35
CLSTN1O94985 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLSTN1O94985 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLSTN1O94985 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 CYMP-203ENST00000474680 1263 ntBASIC17.23■□□□□ 0.35
CLSTN1O94985 RN7SL618P-201ENST00000477850 296 ntBASIC17.23■□□□□ 0.35
CLSTN1O94985 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 AC051619.7-201ENST00000568314 623 ntBASIC17.23■□□□□ 0.35
CLSTN1O94985 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLSTN1O94985 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLSTN1O94985 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC17.23■□□□□ 0.35
CLSTN1O94985 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLSTN1O94985 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.23■□□□□ 0.35
CLSTN1O94985 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLSTN1O94985 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 AC092053.3-201ENST00000641308 4975 ntBASIC17.22■□□□□ 0.35
CLSTN1O94985 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.22■□□□□ 0.35
CLSTN1O94985 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.22■□□□□ 0.35
CLSTN1O94985 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.22■□□□□ 0.35
CLSTN1O94985 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.22■□□□□ 0.35
CLSTN1O94985 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CLSTN1O94985 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 DMBT1P1-203ENST00000636837 4628 ntBASIC17.22■□□□□ 0.35
CLSTN1O94985 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLSTN1O94985 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLSTN1O94985 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLSTN1O94985 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms