Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 COX20P2-201ENST00000452636 358 ntBASIC14.5□□□□□ -0.09
TRIM3O75382 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM3O75382 DOC2GP-202ENST00000514950 1163 ntBASIC14.5□□□□□ -0.09
TRIM3O75382 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM3O75382 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC092337.1-201ENST00000568699 1129 ntBASIC14.5□□□□□ -0.09
TRIM3O75382 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC004790.1-201ENST00000612686 536 ntBASIC14.5□□□□□ -0.09
TRIM3O75382 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.5□□□□□ -0.09
TRIM3O75382 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRIM3O75382 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 AC006486.2-201ENST00000624246 2199 ntBASIC14.49□□□□□ -0.09
TRIM3O75382 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.49□□□□□ -0.09
TRIM3O75382 GNAQP1-201ENST00000444815 1067 ntBASIC14.49□□□□□ -0.09
TRIM3O75382 CRB3P1-201ENST00000449338 276 ntBASIC14.49□□□□□ -0.09
TRIM3O75382 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 AC190387.1-201ENST00000551683 408 ntBASIC14.49□□□□□ -0.09
TRIM3O75382 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 AL450472.2-201ENST00000603663 1156 ntBASIC14.49□□□□□ -0.09
TRIM3O75382 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM3O75382 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM3O75382 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRIM3O75382 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM3O75382 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM3O75382 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM3O75382 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM3O75382 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM3O75382 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms