Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.19■□□□□ 0.02
PEX1O43933 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 HAUS4P1-201ENST00000406739 1145 ntBASIC15.19■□□□□ 0.02
PEX1O43933 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.19■□□□□ 0.02
PEX1O43933 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.19■□□□□ 0.02
PEX1O43933 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.19■□□□□ 0.02
PEX1O43933 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 Z92544.3-201ENST00000624747 417 ntBASIC15.19■□□□□ 0.02
PEX1O43933 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.19■□□□□ 0.02
PEX1O43933 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PEX1O43933 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.19■□□□□ 0.02
PEX1O43933 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
PEX1O43933 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
PEX1O43933 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 U82695.1-201ENST00000635752 1889 ntBASIC15.18■□□□□ 0.02
PEX1O43933 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
PEX1O43933 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.18■□□□□ 0.02
PEX1O43933 CNN2P2-201ENST00000443536 909 ntBASIC15.18■□□□□ 0.02
PEX1O43933 CNN2P3-201ENST00000450201 906 ntBASIC15.18■□□□□ 0.02
PEX1O43933 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 KRT18P34-201ENST00000488218 1270 ntBASIC15.18■□□□□ 0.02
PEX1O43933 AC067863.1-201ENST00000494933 530 ntBASIC15.18■□□□□ 0.02
PEX1O43933 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.18■□□□□ 0.02
PEX1O43933 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.18■□□□□ 0.02
PEX1O43933 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.18■□□□□ 0.02
PEX1O43933 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.18■□□□□ 0.02
PEX1O43933 AL136317.3-201ENST00000618497 906 ntBASIC15.18■□□□□ 0.02
PEX1O43933 AP001059.3-201ENST00000619053 235 ntBASIC15.18■□□□□ 0.02
PEX1O43933 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.18■□□□□ 0.02
PEX1O43933 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PEX1O43933 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PEX1O43933 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PEX1O43933 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms