Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 AC006335.1-201ENST00000445200 547 ntBASIC20.2■□□□□ 0.82
PIK3C2AO00443 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 MIR6720-201ENST00000611664 98 ntBASIC20.2■□□□□ 0.82
PIK3C2AO00443 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PIK3C2AO00443 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PIK3C2AO00443 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 NDUFS6P1-201ENST00000485187 316 ntBASIC20.19■□□□□ 0.82
PIK3C2AO00443 AC019193.1-201ENST00000506678 823 ntBASIC20.19■□□□□ 0.82
PIK3C2AO00443 IGLV3-15-201ENST00000518356 244 ntBASIC20.19■□□□□ 0.82
PIK3C2AO00443 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 AC131206.1-201ENST00000538078 1211 ntBASIC20.19■□□□□ 0.82
PIK3C2AO00443 CAP2P1-201ENST00000557743 1390 ntBASIC20.19■□□□□ 0.82
PIK3C2AO00443 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PIK3C2AO00443 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PIK3C2AO00443 MIR3677-201ENST00000578964 60 ntBASIC20.19■□□□□ 0.82
PIK3C2AO00443 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 NPM1P43-201ENST00000558669 786 ntBASIC20.18■□□□□ 0.82
PIK3C2AO00443 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 AC006453.1-201ENST00000636037 1257 ntBASIC20.18■□□□□ 0.82
PIK3C2AO00443 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PIK3C2AO00443 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.18■□□□□ 0.82
PIK3C2AO00443 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PIK3C2AO00443 AL590440.2-201ENST00000641973 1595 ntBASIC20.17■□□□□ 0.82
PIK3C2AO00443 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.17■□□□□ 0.82
PIK3C2AO00443 REXO1L2P-201ENST00000425429 2069 ntBASIC20.17■□□□□ 0.82
PIK3C2AO00443 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PIK3C2AO00443 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PIK3C2AO00443 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms