Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 AC026979.3-201ENST00000607315 403 ntBASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 AC148477.8-201ENST00000624298 468 ntBASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 AL645728.2-202ENST00000641679 227 ntBASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 CICP20-201ENST00000443330 2801 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 BCAR1-209ENST00000546196 1340 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 HCG4P8-203ENST00000443049 980 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 RARRES2P8-201ENST00000566335 367 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 AC099522.2-201ENST00000607001 744 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 AC004877.2-201ENST00000623941 599 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 AC008267.7-201ENST00000624570 1194 ntBASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV3S1A0A5B6 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC105206.1-202ENST00000314927 2368 ntBASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms