Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 FAM8A3P-201ENST00000427218 844 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 EEF1DP4-201ENST00000446006 880 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 FAAHP1-202ENST00000446499 1238 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AC097359.2-201ENST00000604992 2389 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 MTHFR-210ENST00000641407 2387 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AC084364.1-201ENST00000551967 1556 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 AKAP8P1-201ENST00000434743 1349 ntBASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV5A0A0B4J249 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.07□□□□□ -0.48
TRAV5A0A0B4J249 AL355306.1-201ENST00000415580 579 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms