Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SPDYE17-201ENST00000412399 783 ntBASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC004832.2-201ENST00000426397 482 ntBASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC105021.1-202ENST00000570572 669 ntBASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 FLJ16779-201ENST00000612722 7638 ntBASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRBV6-7A0A0A0MS04 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PCDHA3-202ENST00000532566 4594 ntBASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 HTR5BP-201ENST00000430851 1154 ntBASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 BANF1P1-201ENST00000553684 263 ntBASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 MTDHP5-201ENST00000598980 586 ntBASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TRBV6-7A0A0A0MS04 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
TRBV6-7A0A0A0MS04 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.96□□□□□ -0.33
TRBV6-7A0A0A0MS04 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV6-7A0A0A0MS04 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV6-7A0A0A0MS04 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms