Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AC104457.1-201ENST00000401024 814 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AL133499.1-201ENST00000596207 608 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AC004466.1-201ENST00000599515 1080 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 BNIP3P13-201ENST00000599968 566 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AC006449.5-201ENST00000610658 2098 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AC010491.1-201ENST00000563101 2797 ntBASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 EEF1DP6-201ENST00000449232 372 ntBASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 PRKXP1-201ENST00000561423 1122 ntBASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 RN7SL163P-201ENST00000583100 276 ntBASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AL353726.2-201ENST00000623259 884 ntBASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC2Q9Y5Z7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 AC127383.1-201ENST00000444697 1800 ntBASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 AC007274.2-201ENST00000421675 662 ntBASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 GHSR-202ENST00000427970 912 ntBASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 AC012618.1-201ENST00000461223 412 ntBASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 MESTP3-201ENST00000503460 968 ntBASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC2Q9Y5Z7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms