Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 FAM86MP-201ENST00000340703 885 ntBASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 TOMM22P5-201ENST00000416399 439 ntBASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 LINC01115-203ENST00000606068 577 ntBASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AC011270.2-201ENST00000624293 2550 ntBASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AP005482.1-201ENST00000563722 1273 ntBASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 MIR4525-201ENST00000580000 75 ntBASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHB1Q9Y5F3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 HYMAI-201ENST00000635591 3347 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms