Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 MIR3677-201ENST00000578964 60 ntBASIC14.17□□□□□ -0.14
DKK4Q9UBT3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 RPL17P45-201ENST00000586289 509 ntBASIC14.17□□□□□ -0.14
DKK4Q9UBT3 AC008825.2-201ENST00000603374 718 ntBASIC14.17□□□□□ -0.14
DKK4Q9UBT3 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 AC092299.1-201ENST00000632679 757 ntBASIC14.17□□□□□ -0.14
DKK4Q9UBT3 AC002472.3-201ENST00000640124 621 ntBASIC14.17□□□□□ -0.14
DKK4Q9UBT3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DKK4Q9UBT3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 PRORSD1P-202ENST00000563365 2154 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 OR2K2-202ENST00000374428 1038 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 PSMD4P1-201ENST00000433951 1109 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 LYPLA2P1-203ENST00000447689 696 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 ALG1L6P-201ENST00000515248 758 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 C2orf69P1-201ENST00000563532 1093 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 MIR4683-201ENST00000579659 81 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 FAM90A7P-201ENST00000382628 1395 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 FAM90A23P-201ENST00000400136 1395 ntBASIC14.16□□□□□ -0.14
DKK4Q9UBT3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DKK4Q9UBT3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 AC055811.4-201ENST00000624039 1754 ntBASIC14.15□□□□□ -0.14
DKK4Q9UBT3 KRT8P21-201ENST00000430398 1491 ntBASIC14.15□□□□□ -0.14
DKK4Q9UBT3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 RPL18AP3-201ENST00000462885 528 ntBASIC14.15□□□□□ -0.14
DKK4Q9UBT3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 SAMD11P1-201ENST00000571429 661 ntBASIC14.15□□□□□ -0.14
DKK4Q9UBT3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 AC105137.3-201ENST00000617588 984 ntBASIC14.15□□□□□ -0.14
DKK4Q9UBT3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
DKK4Q9UBT3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms