Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 AL645728.2-202ENST00000641679 227 ntBASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.75□□□□□ -0.21
CLCF1Q9UBD9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 RPL7P3-201ENST00000441388 714 ntBASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AP000812.2-201ENST00000538934 718 ntBASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 CICP13-201ENST00000422015 2789 ntBASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCF1Q9UBD9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 RNU1-114P-201ENST00000365297 166 ntBASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 RPL5P21-201ENST00000404620 815 ntBASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 AC016694.1-201ENST00000434179 700 ntBASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 AC007551.1-201ENST00000457394 519 ntBASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 KRT90P-201ENST00000549264 1064 ntBASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCF1Q9UBD9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms