Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 AC105917.1-201ENST00000506637 2539 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 DFFBP1-201ENST00000433250 979 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 AL132655.2-201ENST00000596276 594 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 AL391825.1-201ENST00000457671 1364 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 AC092127.1-201ENST00000567093 3455 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 AC138969.3-201ENST00000546612 1459 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 AC138932.2-201ENST00000548268 1459 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 AC126755.4-201ENST00000549796 1459 ntBASIC13.28□□□□□ -0.28
GCM1Q9NP62 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
GCM1Q9NP62 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.27□□□□□ -0.28
GCM1Q9NP62 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 AL353779.1-201ENST00000434793 351 ntBASIC13.27□□□□□ -0.29
GCM1Q9NP62 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 RARRES2P5-201ENST00000564013 466 ntBASIC13.27□□□□□ -0.29
GCM1Q9NP62 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 SLC7A15P-201ENST00000424028 1363 ntBASIC13.27□□□□□ -0.29
GCM1Q9NP62 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GCM1Q9NP62 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 DBET-201ENST00000630918 3363 ntBASIC13.27□□□□□ -0.29
GCM1Q9NP62 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GCM1Q9NP62 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
GCM1Q9NP62 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GCM1Q9NP62 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms