Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J3Q9H1A7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AL627223.1-201ENST00000416693 442 ntBASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 HIST3H2BA-201ENST00000436555 524 ntBASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AC084364.1-201ENST00000551967 1556 ntBASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J3Q9H1A7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.36□□□□□ -0.11
POLR2J3Q9H1A7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms