Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 AC022400.8-201ENST00000623453 3599 ntBASIC11.29□□□□□ -0.6
VAMP8Q9BV40 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VAMP8Q9BV40 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC008406.3-201ENST00000620001 1374 ntBASIC11.28□□□□□ -0.6
VAMP8Q9BV40 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC103564.2-201ENST00000432853 1299 ntBASIC11.28□□□□□ -0.6
VAMP8Q9BV40 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC011481.3-201ENST00000623895 5594 ntBASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC023794.5-201ENST00000564380 2157 ntBASIC11.28□□□□□ -0.6
VAMP8Q9BV40 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AC016397.2-201ENST00000624848 1985 ntBASIC11.28□□□□□ -0.6
VAMP8Q9BV40 CICP1-201ENST00000416803 2410 ntBASIC11.28□□□□□ -0.6
VAMP8Q9BV40 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VAMP8Q9BV40 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
VAMP8Q9BV40 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VAMP8Q9BV40 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VAMP8Q9BV40 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VAMP8Q9BV40 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms