Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 COL6A4P2-202ENST00000504443 2753 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 TMEM198B-204ENST00000484016 896 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 DUX4L26-201ENST00000489078 1255 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 OR7E47P-204ENST00000575924 449 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AC024267.1-201ENST00000582320 895 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AL355877.3-201ENST00000622820 899 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AL121956.5-201ENST00000625261 221 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AC133561.5-201ENST00000635547 218 ntBASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MBD3L1Q8WWY6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AC073621.1-201ENST00000392730 636 ntBASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 MRPL20P1-201ENST00000400819 433 ntBASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AC092474.2-201ENST00000424288 719 ntBASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 KRT18P27-201ENST00000427733 1299 ntBASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AC061975.2-201ENST00000581722 295 ntBASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms