Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC073508.3-201ENST00000619697 1419 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC087499.1-201ENST00000418141 1075 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 DRAXINP1-201ENST00000437611 948 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC074051.2-201ENST00000565115 352 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 MIR3909-201ENST00000579518 119 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC027612.1-201ENST00000445234 2395 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AL356585.2-201ENST00000625078 2396 ntBASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SMIM11BQ8TCY0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 LINC00265-3P-201ENST00000447588 903 ntBASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 TPSP2-201ENST00000561760 610 ntBASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 AL136038.3-201ENST00000561909 1096 ntBASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 AL591684.3-201ENST00000605187 298 ntBASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 AC006011.2-201ENST00000621313 1158 ntBASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SMIM11BQ8TCY0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms